Publications

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2017
Schulz, D  M, da Cunha R  D, Barichello L  B.  2017.  On The Acceleration Of The Source Iteration Method. ANS MC2017 - Joint International Conference on Mathematics and Computation (M&C), Supercomputing in Nuclear Applications (SNA) and the Monte Carlo (MC) Method. :1–7.: American Nuclear Society Abstract
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Ferrareze, PAG, Streit RSA, Dos Santos FM, Schrank A, Kmetzsch L, Vainstein MH, Staats CC.  2017.  sRNAs as possible regulators of retrotransposon activity in Cryptococcus gattii VGII. BMC Genomics. 18, Number 1 AbstractWebsite
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Brondani, JR, de Freitas EP, Silva LAL.  2017.  A task-oriented and parameterized (semi) autonomous navigation framework for the development of simulation systems. Procedia Computer Science. 112:534-543., Number Supplement C AbstractWebsite
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Ferrareze, PAG, Streit RSA, Dos Santos PR, Dos Santos FM, de Almeida RMC, Schrank A, Kmetzsch L, Vainstein MH, Staats CC.  2017.  Transcriptional analysis allows genome reannotation and reveals that cryptococcus gattii VGII undergoes nutrient restriction during infection. Microorganisms. 5, Number 3 AbstractWebsite
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Gonçalves, VP, Machado MVT, Moreira BD, Navarra FS, dos Santos SG.  2017.  {Color dipole predictions for the exclusive vector meson photoproduction in $pp$ , $pPb$ , and PbPb collisions at run 2 LHC energies}. Phys. Rev. D. 96:094027., Number 9 Abstract
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dos Santos, GS, Machado MVT.  2017.  {Investigating the Prompt Photon Production at the LHC Energies}. Int. J. Mod. Phys. Conf. Ser.. 45(Lunkes dos Santos, Alexander, Zen Vasconcellos, César Augusto, Tavares da Silva, Daniel, Hadjimichef, Dimiter, Weber, Fridolin, Machado, Magno Valério Trindade, Lopes da Silva, Mário Luiz, Xu, Renxin, Greiner, Walter, Eds.).:1760061. Abstract
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2016
Scheid Filho, R, Eckhard D, Gonçalves da Silva GR, Campestrini L.  2016.  Application of Virtual Reference Feedback Tuning to a non-minimum phase pilot plant, Sept. 2016 IEEE Conference on Control Applications (CCA). :1318–1323., Buenos Aires: IEEE Abstract

Virtual Reference Feedback Tuning (VRFT) is a data-driven technique used to design controllers without the need of a process model, only input-output data is utilized. When the process has non-minimum phase (NMP) zeros, the original method usually presents poor performance, because scarcely the reference model has the same NMP zeros as the process. To overcome this problem, a flexible criterion has been proposed to the VRFT method, in a way that both the controller parameters and the NMP zeros of the process are estimated together. In this paper we present the application of the VRFT method with flexible criterion to the level control of a MIMO pilot plant. We show that a sequential controller design may incorporate NMP behavior to the process. We then use the VRFT method with flexible criterion to design the controller using only closed-loop data from the process.

Salton, AT, Eckhard D, Flores JV, Fernandes G, Azevedo G.  2016.  Disturbance observer and nonlinear damping control for fast tracking quadrotor vehicles, Sept. 2016 IEEE Conference on Control Applications (CCA). :705–710., Buenos Aires: IEEE Abstract

This paper considers the design and implementation of a discrete-time fast tracking controller for quadrotor vehicles subject to perturbations. The proposed controller consists of a model-based disturbance observer and a Composite Nonlinear Feedback (CNF) controller. The CNF control law introduces nonlinear damping to the system so that it possesses a fast rise time without overshoot. The least square identification method is applied to develop a model based disturbance observer, thus decoupling the problems of track following and disturbance rejection. Experimental results are provided in order to validate the proposed approach.

Flores, JV, Eckhard D, Salton AT.  2016.  Modified {MIMO} Resonant Controller Robust to Period Variation and Parametric Uncertainty, Sept. 2016 {IEEE} Conference on Control Applications ({CCA}). :1256–1261., Buenos Aires: IEEE Abstract

In this work a modified Resonant Controller is proposed to deal with the tracking/rejection problem of periodic signals robust to period variations and parametric uncertainties in the plant. The control strategy is based on a resonant structure in series with a notch filter, which will be responsible to improve the robustness to period variation. A robust state feedback controller is designed by solving a linear matrix inequality (LMI) optimization problem guaranteeing the robust stability of the closed loop system. A numerical example is presented to illustrate the method.

Haas, AN, Silva-Boghossian CM, Colombo AP, Albandar J, Oppermann RV, Rosing CK, Susin C.  2016.  Predictors of clinical outcomes after periodontal treatment of aggressive periodontitis: 12-month randomized trial, May 20. Braz Oral Res. 30, Number 1 AbstractWebsite

Little is known about the factors that may be used in clinical practice to predict the therapeutic response of aggressive periodontitis patients. The aim of this study was to determine predictors of clinical outcomes after non-surgical treatment of aggressive periodontitis. A total of 24 patients (aged 13-26 years) received oral hygiene instructions, as well as subgingival scaling and root planing. Twelve subjects received systemic azithromycin at random. Clinical variables were assessed at baseline, 3, 6, 9, and 12 months. Baseline microbiological assessment was performed by checkerboard DNA-DNA hybridization. Multivariable models used generalized estimating equations. There were significant improvements in the entire sample in regard to pocket depth, clinical attachment level and bleeding on probing. Significant predictors of a reduction in mean pocket depth were: use of azithromycin, non-molar teeth, generalized disease and baseline pocket depth. Absence of plaque predicted a 0.22 mm higher attachment gain, whereas a baseline pocket depth >/=7 mm predicted a 1.36 mm higher attachment loss. Azithromycin, plaque, and baseline pocket depth were significant predictors of bleeding on probing. The concomitant presence of all three red complex species predicted a 0.78 mm higher attachment loss. It may be concluded that dental plaque, tooth type, disease extent, baseline pocket depth, and use of azithromycin were significant predictors of the clinical response to treatment for aggressive periodontitis in young individuals. Moreover, the presence of multiple periodontal pathogens may predict challenges in achieving a favorable outcome for aggressive periodontitis.

de Nunes, HS, Schramm R, Jung CR, Coelho LW.  2016.  Automated Sight-singing Assessment Tool, July. 14th International Conference on Music Perception and Cognition. :529-533., San Francisco Abstract
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Gaio, EJ, Haas AN, Rosing CK, Oppermann RV, Albandar JM, Susin C.  2016.  Effect of obesity on periodontal attachment loss progression: a 5-year population-based prospective study, Jul. J Clin Periodontol. 43:557-65., Number 7 AbstractWebsite

AIM: The aim of this study was to assess the effect of overweight and obesity on periodontal attachment loss (PAL) progression in an urban population from south Brazil. METHODS: In 2001, a population-based oral health survey entitled "Epidemiology of periodontal diseases: the Porto Alegre Study" was conducted by drawing a probabilistic sample of 1586 individuals. After 5 years, 755 (participation rate: 47.6%) individuals were re-examined. For this analysis, self-reported diabetics, underweight individuals, and individuals with <6 teeth were excluded. Poisson regressions were used to calculate relative risks (RR) and 95% confidence intervals (CI) adjusted for sex, age, skin colour, education, socio-economic status, smoking and dental care. RESULTS: Five hundred and eighty-two individuals (333 males/249 females, 36.02 +/- 14.97 years) were included. Overall, obese individuals had significantly higher risk of experiencing PAL progression than individuals with normal weight after adjusting for important co-factors (RR = 1.36, 95% CI = 1.04-1.78). In a stratified analysis, no statistically significant associations were observed between PAL progression and obesity for males (RR = 1.13, 95% CI = 0.75-1.69), whereas obese females were at statistically significant higher risk than normal weight females (RR = 1.64, 95% CI = 1.11-2.43). CONCLUSION: Obesity appears to be a risk factor for PAL progression for females but not males in this developing country population.

Mendez, M, Haas AN, Rados PV, Sant'ana FM, Carrard VC.  2016.  Agreement between clinical and histopathologic diagnoses and completeness of oral biopsy forms, Aug 22. Braz Oral Res. 30:e94., Number 1 AbstractWebsite

The present study aimed to assess the rate of agreement between clinical and histopathological diagnoses and to report the frequency of completed forms for specimens that were subjected to histopathological examination and retrospectively examined. Data from 8,168 specimens submitted to histopathological examination were retrieved from the records. A total of 5,368 cases were included. Agreement was defined based on the definition of lesion nature according to its diagnostic category. Sensitivity, specificity, and positive and negative predictive values were calculated for each diagnostic category. The highest rate of agreement was observed for periapical lesions (92.6%), followed by potentially malignant disorders (90.1%) and non-neoplastic proliferative disorders (89.3%). Low rates of histopathological confirmation of the clinical impression were observed for mesenchymal tumors (25.0%) and cysts (44.2%). Sensitivity values were > 0.70 for all lesions, except for cysts (0.51). Specificity was relatively high, ranging from 0.97 to 1.00. The frequency of incomplete biopsy forms ranged from 16.8% (malignant tumors of oral mucosal epithelium) to 51.0% (nonspecific inflammatory reaction). The most frequently completed biopsy forms corresponded to epithelial malignant tumors (83.2%) and glandular inflammation (72.3%). In conclusion, there was an acceptable level of agreement. The low level of completeness of biopsy forms indicates little awareness about the relevance of gathering detailed information during clinical examination.

Zanella, SM, Pereira SS, Barbisan JN, Vieira L, Saba-Chujfi E, Haas AN, Rosing CK.  2016.  Periodontal disease, tooth loss and coronary heart disease assessed by coronary angiography: a cross-sectional observational study, Apr. J Periodontal Res. 51:221-7., Number 2 AbstractWebsite

OBJECTIVE AND BACKGROUND: To evaluate the association between periodontal disease, tooth loss and coronary heart disease (CHD). There is still controversy about the relationship between periodontal disease and tooth loss with vessel obstruction assessed using coronary angiography. MATERIAL AND METHODS: This cross-sectional study included 195 patients that underwent coronary angiography and presented with at least six teeth. Patients were classified into three categories of coronary obstruction severity: absence; one or more vessels with /= 50% obstruction. The extent of coronary obstruction was dichotomized into 0 and >/= 1 affected vessels. A periodontist blinded to patient CHD status conducted a full mouth examination to determine mean clinical attachment loss, mean periodontal probing depth and tooth loss. Multiple logistic regression models were applied adjusting for age, gender, hypertension, smoking, body mass index, low-density lipoprotein cholesterol and C-reactive protein. RESULTS: Most patients were males (62.1%) older than 60 years (50.8%), and 61% of them had CHD. Mean periodontal probing depth, clinical attachment loss and tooth loss were 2.64 +/- 0.72 mm, 4.40 +/- 1.31 mm and 12.50 +/- 6.98 teeth respectively. In the multivariable models, tooth loss was significantly associated with a higher chance of having at least one obstructed vessel (odds ratio = 1.04; 95% confidence interval 1.01-1.09) and with vessel obstruction >/= 50% (odds ratio = 1.06; 95% confidence interval 1.01-1.11). No significant associations were found between periodontal variables and vessel obstruction. CONCLUSION: Tooth loss was found to be a risk indicator for CHD.

Brendler, CF, Teixeira FG, da Silva FP, Müller MS.  2016.  Uso da digitalização 3D do corpo humano para desenvolvimento de produtos personalizados: Análise comparativa entre os scanners Artec EVA e o Kinect, 2016. Estudos em Design (Online). 24:41-60. AbstractFull Text

The aim of this paper is comparing both tridimensional scanners: white light Artec Eva; and Infra-red light Microsoft Kinect. This comparison enables evaluate possibilities of these equipments for developing user-centered product projects. It was carried out comparison's concerning both precision and dimensional deviation through virtual and physical models generated by CAD and CAM systems. It was verified the need of eliminating the human body movement by using physical models in the performed analysis. As a result, both scanners demonstrated measurement precision, with the advantage of Artec Eva over Microsoft Kinect. The selection of the most appropriated scanner concerning the projects needs evolves factors such as: the available cost for the project; and the required precision fidelity for the aimed product. Both digital scanners considered in this paper contribute to the development of customized products, showing the relationships between tools and needed product fidelity.

Mair, CE, Silva CM, Grienke U, Kratz JM, Carreno F, Zimmerman ES, Araujo BV, Dalla Costa T, Rollinger J.  2016.   Pharmacokinetics of hERG channel blocking voacangine in Wistar rats applying a validated LC-MS/MS method. Planta Medica.
Pigatto, MC, de Araujo BV, Torres BG, Silva C, Schmidt S, Magni P, Dalla Costa T.  2016.   Population Pharmacokinetic Modeling of Etoposide Free Concentrations in Solid Tumor. Pharmaceutical Research.
Schramm, R, de Nunes HS, de Nunes LA, Visi F, Miranda ER.  2016.  3CMS: An Interactive Decision System for Live Performance. Music, Mind, and Embodiment: 11th International Symposium, CMMR 2015, Plymouth, UK, June 16-19, 2015, Revised Selected Papers. LNCS 9617(Kronland-Martinet, Richard, Aramaki, Mitsuko, Ystad, Sølvi, Eds.).:190—210.: Springer International Publishing Abstract

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Visi, F, Coorevits E, Schramm R, Miranda E.  2016.  Analysis of Mimed Violin Performance Movements of Neophytes. Music, Mind, and Embodiment: 11th International Symposium, CMMR 2015, Plymouth, UK, June 16-19, 2015, Revised Selected Papers. LNCS 9617(Kronland-Martinet, Richard, Aramaki, Mitsuko, Ystad, Sølvi, Eds.).:88–108.: Springer International Publishing Abstract

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Schramm, R, Nunes HDS, Jung CR.  2016.  Audiovisual Tool for Solfège Assessment. ACM Trans. Multimedia Comput. Commun. Appl.. 13:9:1–9:21., Number 1, New York, NY, USA: ACM AbstractWebsite

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Simoni, A, Dagnino R.  2016.  Dinâmica demográfica da população indígena em áreas urbanas: o caso da cidade de Altamira, Pará. Revista Brasileira de Estudos de População. 33(2):303-326. Abstract2016_rebep_simoni_dagnino.pdfScielo

This paper focus on indigenous people in the municipality of Altamira, in the State of Pará, Brazil, emphasizing the presence of indigenous people in urban areas and especially in the city of Altamira. The purpose here is to understand the dynamics and movements of these populations in regard to the data produced about them and the data produced by them. For that, data from fieldwork are used, as well as the demographic censuses data of 2000 and 2010, produced by the Brazilian Institute of Geography and Statistics, and also information from surveys produced because of the construction of the hydroelectric plant of Belo Monte to identify the indigenous people living in the city. The paper intends to capture the processes by which the indigenous population has passed and still passes, highlighting the threats posed by the Belo Monte dam construction and by political forces that have put this population at risk. The results point to a growing presence populations in urban areas, mainly from the Juruna, Kuruaya and Xipaya ethnicities who once seemed to have decreased significantly, but underwent to a demographic recovery process in the city, associated with a political movement pivot around their ethnic identity since the 1990's.

Azeredo, FJ, Hass SE, Sansone P, Derendorf H, Dalla Costa T, de Araujo BV.  2016.  Does the Anesthetic Urethane Influence the Pharmacokinetics of Antifungal Drugs? A Population Pharmacokinetic Investigation in Rats. Journal of Pharmaceutical Sciences.
Ferreira, AP, Bernardi JR, Ferreira CF, Pereira AB, dos Santos DA, Ferreira PK, dos Santos KF, Bosa VL, Pereira LW, da Silva CH, Wainer M, Goldani MZ.  2016.  Fatores associados ao número de consultas pré-natais de mulheres tabagistas e não tabagistas atendidas em hospitais de Porto Alegre. Saúde em Redes. 2(2):167-178.