Publications

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2024
Castelli, RF, Pereira A, Honorato L, Valdez A, de Oliveira HC, Bazioli JM, Garcia AWA, Klimeck TD'MF, Reis FCG, Camillo-Andrade AC, Santos MDM, Carvalho PC, Zaragoza O, Staats CC, Nimrichter L, Fill TP, Rodrigues ML.  2024.  Corrected and republished from: “Extracellular Vesicle Formation in Cryptococcus deuterogattii Impacts Fungal Virulence”. Infection and Immunity. 92, Number 4 AbstractWebsite
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Castelli, RF, Pereira A, Honorato L, Valdez A, de Oliveira HC, Bazioli JM, Garcia AWA, Klimeck TD'MF, Reis FCG, Staats CC, Nimrichter L, Fill TP, Rodrigues ML.  2024.  Erratum: Correction for Castelli et al., "Extracellular Vesicle Formation in Cryptococcus deuterogattii Impacts Fungal Virulence and Requires the NOP16 Gene" (Infection and immunity (2022) 90 8 (e0023222)). Infection and immunity. 92:e0004924., Number 4 AbstractWebsite
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2023
Soletti, R, Camboim Rockett G, Aparecida Ferreira de Barros N, Fernandino G.  2023.  Práticas de descarte de medicamentos e resíduos sólidos de produtos de higiene pessoal no Litoral sul do Brasil - subsídios para gestão, dic.. Costas. 5:51–66., Number 2 AbstractWebsite
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Souza, WPSF, Ziegelmann FA, Figueiredo EA.  2023.  (Portuguese) O Impacto do Comércio Internacional sobre as Condições de Saúde: uma Abordagem Estrutural. Revista Brasileira de Economia. 77(2):e122023.
Popik, B, Guerra KTK, Luft JG, Fernandes HS, De Oliveira Alvares L.  2023.  Characterization of deconditioning-update on fear memory attenuation. Neurobiology of Learning and Memory.
Haas, F, Fichtner H, Scherer K.  2023.  Electron holes in a regularized kappa background. Nonlinear Processes in Geophysics. 30(3):277-287.
Siqueira, M, Ferrari CG, de Rodrigues JC, Baiocco L, de Oliveira TM, Jr SD, Marques D.  2023.  Evidências de validade de Tarefas de Compreensão de Metáforas Primárias: uma revisão da literatura. Letrônica. 16(1):e44362.2023. Siqueira, Ferrari, Rodrigues, Baiocco, Oliveira, Duarte Jr, Marques.pdfWebsite
Siqueira, M, Melo T, Duarte Jr. S, Baiocco L, Ferrari CG, Lopes N.  2023.  Many hands on this study: Development of a metonymy comprehension task. DELTA. Documentação de Estudos em Lingüística Teórica e Aplicada. 39(3):1-28.2023. Siqueira, Melo, Duarte Jr., Baiocco, Ferrari, Lopes.pdfWebsite
Siqueira, M, Ferrari CG, Tota F, da da Silva Tavares VR.  2023.  Metáfora e argumentação em tweets sobre medidas preventivas para a Covid-19. Signo. 49(91):42-57.2023. Siqueira, Ferrari, Tota, Silva Tavares.pdfWebsite
Cintra, RF, Valk M, Filho DM.  2023.  A model-free-based control chart for batch process using U-statistics. Journal of Process Control. Website
Franke, L, Vieira M, Fonseca PCD.  2023.  Os caminhos para o desenvolvimento do Brasil: revisita às interpretações de Celso Furtado e de Fernando Henrique Cardoso. História Econômica & História de Empresas. 26(1):172-207.frank_vieira_e_fonseca.pdf
Abreu, E, Ferraz P, Espírito Santo AM, Pereira F, Santos LGC, Sousa FS.  2023.  Recursive formulation and parallel implementation of multiscale mixed methods. Journal of Computational Physics. 473:111681. AbstractWebsite

Multiscale methods for second order elliptic equations based on non-overlapping domain decomposition schemes have great potential to take advantage of multi-core, state-of-the-art parallel computers. These methods typically involve solving local boundary value problems followed by the solution of a global interface problem. Known iterative procedures for the solution of the interface problem have typically slow convergence, increasing the overall cost of the multiscale solver. To overcome this problem we develop a scalable recursive solution method for such interface problem that replaces the global problem by a family of small interface systems associated with adjacent subdomains, in a hierarchy of nested subdomains. Then, we propose a novel parallel algorithm to implement our recursive formulation in multi-core devices using the Multiscale Robin Coupled Method by Guiraldello et al. (2018) [26], that can be seen as a generalization of several multiscale mixed methods. Through several numerical studies we show that the new algorithm is very fast and exhibits excellent strong and weak scalability. We consider very large problems, that can have billions of discretization cells, motivated by the numerical simulation of subsurface flows.

Freitas, MWD, de Dagnino RS, Mangia CMF, de CANALEZ GG, de Barros EF, Carcillo JA.  2023.  Understanding Covid-19 widespread in Brazil and the Legal Amazon by social, environmental and human mobility factors. Sociedade de Riscos Sanitários. :135-148., Curitiba: CRV Abstract

The present study analyzed how the economic, social and human mobility factors were responsible for dissemination of Covid -19 in Brazil and the Legal Amazon region. Human mobility was analyzed by four dimensions according to the network's hierarchies of: migration, pendular mobility, airlift, hydro and road routes and healthcare system. Manaus, capital of Amazon, was the first diffuser pole of cases; this may be explained by absence of public lockdown policies and restriction of mobility by river routes and airport system. In the face of the worsening of the pandemic, between March to May 2020, the previous migratory pattern of the urban population was accentuated to inland Amazonian cities that spread the virus towards remote areas of the Amazon. In addition, there was a pendular migratory movement to Manaus, which is the only center in the region with highly complex hospitals; this fact led to a strong migratory movement of populations seeking medical assistance. The analysis on migration revealed a close relation of the spatiotemporal behavior of Covid-19 spread and the migration network to Manaus. There were significant correlations related to fluvial or waterway transportation axis along the Amazon River which is the dominant route of the region. These pathways have long distances to be covered from one pole to another and were additional factors for the spread of the pandemic during the period studied and have long travel times that can be an important factor for COVID-19 further dissemination. We conclude that the wide dissemination of COVID-19 cases across the Legal Amazon was the result of multifactorial causes that include social inequities, vulnerability, high rate of mobility and migration, information failure and administrative and social management of the crisis.

Ferrari, CG, Siqueira M.  2023.  Where there's a proverb, there are many conceptual mappings. Crossroads. A journal of English studies. 43:57-81.2023. Ferrari e Siqueira.pdfWebsite
Ladeia, CA, Schramm M, Fernandes JCL, Zanetti HR, Albuquerque AD.  2023.  The Influence of the Refractive Index and Absorption Coefficients in the Solution of the Radiative Conductive Transfer Equation in Cartesian Geometry. Integral Methods in Science and Engineering. (Constanda, Christian, Bardo E. J. Bodmann, Harris, Paul J., Eds.).:179–189., Cham: Springer International Publishing Abstract
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Souza Filho, JR, Chagas AAS, Silva IR, Guimarães JK, Sakanaka TE, Fernandino G.  2023.  Litter Reduction during Beach Closure in the Context of the COVID-19 Pandemic: Quantifying the Impact of Users on Beach Litter Generation. Sustainability. 15, Number 3 AbstractWebsite

This study aimed to quantify marine litter before and during the COVID pandemic found on urban touristic beaches closed to beachgoer access in northeastern Brazil. Litter identification and quantification was conducted during April, June, and August 2019, when 3583 items were sampled, and replicated during the same months in 2020, when access to the beaches studied was prohibited and a significant reduction in the amount of litter was found, 1812 items (49% decrease). Transects were used to monitor and classify litter according to its source, namely: autochthonous (litter that was locally discarded) and allochthonous (litter from other sites and sources). All beaches were classified as “very clean” and presented a smaller amount of litter during the beach closure period. The highest total marine litter reduction between the periods studied was 83%, while autochthonous litter in particular showed the most significant reduction, 88%. The comparison between the quantity and type of litter found in both periods showed greater specific anthropic pressure from beach users.

da Silva Camargo, M, Geremia F, Sbaraini N, Staats CC, Filho MS, Schrank A.  2023.  Molecular characterization of a novel victorivirus (order Ghabrivirales, family Totiviridae) infecting Metarhizium anisopliae. Archives of Virology. 168, Number 3 AbstractWebsite
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Brito, C, Forero DV, Hallberg K, Palma G, Alvear JS, Tancredi G, Tavera W.  2023.  Physics in Latin America. Nature Reviews Physics. 5:502–504., Number 9 AbstractWebsite

The southern skies and tall mountains of Latin America have cultivated a long history of astronomy on the continent. Today, the continent hosts over 80 observatories that are collaborative research centres for the region and the world. But what about other areas of physics? These have benefited from a culture of collaboration, but there are still challenges in fully developing the potential of research on the continent, such as insufficient researchers or resources. In this Viewpoint, seven physicists discuss the varying research landscapes of different areas of physics across the continent.

2022
Frichembruder, K, Prass TS, Hugo FN.  2022.  Série histórica de atendimentos de urgência odontológica no Brasil entre 2008 e 2015, Aug. Ciência & Saúde Coletiva. 27:3215–3226., Number 8: ABRASCO - Associação Brasileira de Saúde Coletiva AbstractWebsite
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Redivo, AS, Fonseca PCD.  2022.  A atuação da Carteira de Crédito Agrícola e Industrial do Banco do Brasil (CREAI): 1937-1969. Revista de Economia Politica. 42(4):1080-1101.redivo_e_fonseca_creai_rep.pdf
Azevedo, LF, Fonseca PCD, Missio F.  2022.  Distribuição de renda e regime de crescimento econômico no Brasil: avaliação e propostas. Revista de Economia Politica. 42(1):25-47.azevedo_fonseca_e_missio_rep.pdf
Fernandes, HS, Popik B, De Oliveira Alvares L.  2022.  Effects of hippocampal IP3R inhibition on contextual fear memory consolidation, retrieval, reconsolidation and extinction. Neurobiology of Learning and Memory.
de Oliveira, BN, Valk M, Filho DM.  2022.  Fault detection and diagnosis of batch process dynamics using ARMA-based control charts. Journal of Process Control. 111:46-58. AbstractWebsite

A wide range of approaches for batch processes monitoring can be found in the literature. This kind of process generates a very peculiar data structure, in which successive measurements of many process variables in each batch run are available. Traditional approaches do not take into account the time series nature of the data. The main reason is that the time series inference theory is not based on replications of time series, as it is in batch process data. It is based on the variability in a time domain. This fact demands some adaptations of this theory in order to accommodate the model coefficient estimates, considering jointly the batch to batch samples variability (batch domain) and the serial correlation in each batch (time domain). In order to address this issue, this paper proposes a new approach grounded in a group of control charts based on the classical ARMA model for monitoring and diagnostic of batch processes dynamics. The model coefficients are estimated (through the ordinary least square method) for each historical time series sample batch and modified Hotelling and t-Student distributions are derived and used to accommodate those estimates. A group of control charts based on that distributions are proposed for monitoring the new batches. Additionally, those groups of charts help to fault diagnosis, identifying the source of disturbances. Through simulated and real data we show that this approach seems to work well for both purposes.